Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874063.1_cds_XP_016435370.1_31337
CDS Infomation

[gene=LOC107761641] [db_xref=GeneID:107761641] [protein=pentatricopeptide repeat-containing protein At1g09190-like] [protein_id=XP_016435370.1] [location=complement(15461..16915)] [gbkey=CDS]
Sequence

ATGAACAGAGGGAGCCGAGAGGTTGAGCGGAGGATTCTCCGTCTTCTCCACGGTCACAAA
TCTCGAACCCATCTCACTCAAATCCATGCCCACATCCTTCGCCACCATCTTCACCACTCC
AACCAGCTCCTCTCCCACTTCATCTCCATCTGCGGTTCCCTTAATAAAATGCTCTACGCA
TCCCTCGTCTTCCAGCATTTTCACAACCCCAACATTTTCCTCTTCAACTCCATGATCAAA
GGCTACTCCTTATGTGGCCCGTATCAAAATTCTATCTCCTTATTTTCCACCATGAAACAA
CGTGGCATTTGGCCTGATGAGTTCACTTTCGCCCCTTTACTTAAAGCTTGTTCTAATCTT
GAGGATCTGAAATTGGGTCAGAGTGTGCAAAAGAATGTGCTTGCACTTGGGTTTGAGAGA
TTTGGGTCGATAAGGATTGGGATTATTGAGCTGTATTGCGGTTGTGGGAGGATGACGGAT
GCTGAGAAGGTGTTTGATGATATGTCTCATAGAGATGTGATTGTTTGGAATTTGACGATT
AAGGGTTATTGTAAAAGCGGAAATGTGGATATGGGGTTTGGTCTATTTAGTCAAATGGGT
GAGAGGACAGTTGTCTCTTGGAATTTGATGATTTCGTCATTAGCTCAAAATGGGAGGGAG
AAGGAGGCGCTGACACTTTTTGCTGAGATGAGGAATAGTGAGTTCGAGCCCGATGAAGCT
ACGGTTGTTACGATGTTACCTGTTTGTGCTCATTTAGGAGAAATTGATTTGGGAAGGTGG
ATTCACTCTTATGTTAAGTCTAAGGGTCTCTATCCTGATCTCGTATCCGTTGGCAATGCA
TTGGTCGATTTCTTTGGAAAATCTGGTGATTTGGAAGCTGCTTTTACAATATTCAAGGAC
ATGCCTCGGAAAAATGTAGTTTCTTGGAACGCCATGATATCAAACTGTGCTTTTAATGGT
AAGGGTGAATTGGGAGTTAAATTGTTTGATGAGATGTTAGATGAAGATGTGAGACCTAAT
GATTCAACTTTTGTGGGCGTTCTAGCATGTTGTGCCCATGCAGGTTTGGTTCAAAGAGGT
GGAGATTTGTTTGATTCGATGATTGGAAATCATGGTATAGAGCCTACACTTGAGCATTAC
GGATGTATGGTTGATCTTCTAGGTCGTGGGGGTTGTCTAAAGGAGGCTCATAGACTGGTG
AAAACCATGCCAATGGAACCAAATGCTGCTATATGGGGTGCATTGGTTAGTGCTTGTCGC
ACTCATGGTGAAATGGAGCTGGCCGAATATGCACTTAAGGAACTTATAAAACTTGAACCT
TGGAATTCTGGTAACTATGTATTGTTATCCAATATTTATGCTGATAGAGGAAAATGGGAA
GAAGTTGAAAAGGTGAGAATGTTGATGAGGGGAAATAGCATTAAGAAAGCACCAGGACAG
AGCACGGTTGTTTGA

Peptide Sequence

PEP ID

XP_016435370.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g09190-like [Nicotiana tabacum]
Sequence

MNRGSREVERRILRLLHGHKSRTHLTQIHAHILRHHLHHSNQLLSHFISICGSLNKMLYA
SLVFQHFHNPNIFLFNSMIKGYSLCGPYQNSISLFSTMKQRGIWPDEFTFAPLLKACSNL
EDLKLGQSVQKNVLALGFERFGSIRIGIIELYCGCGRMTDAEKVFDDMSHRDVIVWNLTI
KGYCKSGNVDMGFGLFSQMGERTVVSWNLMISSLAQNGREKEALTLFAEMRNSEFEPDEA
TVVTMLPVCAHLGEIDLGRWIHSYVKSKGLYPDLVSVGNALVDFFGKSGDLEAAFTIFKD
MPRKNVVSWNAMISNCAFNGKGELGVKLFDEMLDEDVRPNDSTFVGVLACCAHAGLVQRG
GDLFDSMIGNHGIEPTLEHYGCMVDLLGRGGCLKEAHRLVKTMPMEPNAAIWGALVSACR
THGEMELAEYALKELIKLEPWNSGNYVLLSNIYADRGKWEEVEKVRMLMRGNSIKKAPGQ
STVV

Transcript Sequence

Gene sequence data has not been registered.